I agree about the Shisui part. He even had MS before Itachi, if you think about it. I just didn't understand if Danzo got his eye while he was alive or already dead (Itachi :"The last time I MET Shisui though... Danzo had already taken one eye").
I think Itachi will have his MS (if he is alive now), he probably just turned it off to not waste chakra and besides - he turned off MS but kept his sharingan in "normal mode" (don't know what to call it) so it would be weird for his eyes to just disappear.
I think Itachi will have his MS (if he is alive now), he probably just turned it off to not waste chakra and besides - he turned off MS but kept his sharingan in "normal mode" (don't know what to call it) so it would be weird for his eyes to just disappear.