Because all none bijuu were under rinnegan genjutsu. Rinnegan genjutsu doesn't seem to control time like itachi's tsukyomi and appears to subdue the user's will and possibly mind as well. Woth that argument we could say that Madara just places Hashirama under sharingan genjutsu and pretty much wins.
That's the point, RSM IS Naruto with bijuu powers at least the cloak variant. Naruto has Yin kurama inside him. Even without the bijuu if maruto got close to Sasuke, Sasuke would have to rekease his hands cancellimg CT otherwise....it wouldn't end, CT could work but it wouldn't hold Naruto if it even gets him