One of the better theories around here for quite a while!
However, I'm a bit skeptical about shinsusenju being the gedo mazou, mainly because Kurama knew a lot about the Juubi, and he explained into details its looks and strength. Especially the "gourd" or whatever it is on its back. Nonetheless, it's a nice theory, possible, but unlikely if you ask me.
The best argument is probably the link, that both Obito and Nagato could summon it, even when Obito didn't have any of Madara's DNA, so the only thing they had in common was Hashi's DNA.
but didnt obito say that he needs sauske so he can link with the gedo, that would imply sauske was compatible already unless obtio planned on doing something to him but why would he wanna give sauske hashi cells knowing what he did with the power he earned form orochimaru