You need to read the manga and see how TSB behave. Explosions don't occur when Onmyoudon is being applied, the arrow would have been erased while the goududama remain intact. But they didn't, instead an explosion occurred.You people need to learn the power of gudodama and ability such as omnyudon.![]()
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Later on you can see the TSB missing behind Naruto's back meaning they were temporarily gone
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Susano'o arrows destroyed them and Naruto reshaped them later on. If TSB worked Madara would have used it against Sasuke's Susano'o to trap them in IT.