Below are the facts. Decide for yourself if you come to same conclusion as the thread starter.
Itachi: *activates Mangekyo Sharingan*
*Crow emerges*
Itachi: Good. It came out.
Crow: *activates Mangekyo Sharingan*
Kabuto: I underestimated him. Uchiha Itachi is clearly different! He resisted the Edo Tensei.
Itachi: Success!
Itachi: I'm no longer being controlled. I used a new genjutsu against this enemy jutsu. The Edo Tensei is undone. This genjutsu orders me to protect Konoha.
B: What do you mean?
Itachi: It's implanted in the Crow's eye.
Kabuto: It's his eye! Th-There's only one genjutsu that can do that.
Itachi: Uchiha Shisui's Mangekyo Sharingan. The ultimate genjutsu Koto Amatsukami! The genjutsu restored my control.
Naruto: Uchiha Shisui?
B: You name checking the Uchiha's most powerful genjutsu user, Shisui the Teleporter?
Itachi: Shisui's ocular powers are unique. They create a powerful genjutsu that allows you to control someone without them realizing. I programmed the genjutsu... to protect Konoha into Shisui's eye. I put the command in the crow's eye.