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Rikudou's 2 power sources both stem from the Juubi; his inheritance from his mother and him being the Juubi Jin. Conclusively speaking, the Rinnegan comes from the Juubi's chakra and its effect on the person who has it. He either inherited from her, or directly from the Juubi as its Jin, and he most likely got it from Kaguya given that he'd need such power to oppose the Juubi.
Regarding Obito, the Sharingan is an evolved version of the Rinnegan, strictly speaking if we're talking about the evolutionary chain of Dojutsu. How is it supposed to transform in to a de-evolved version of itself, if it is already the newer Dojutsu?
But that doesn't mean his mother actually had the Rinnegan. There were no panels indicating that she had the Rinnegan, even white zetsu mentioned Madara and Hagaromo to be the only ones awaking the Rinnegan( I think that is Kishi's way of telling us the truth without having to draw an entire panel with Kayga's face since that is resevered for later).
The Sharingan is not the Rinnegan. Without having a Rinnegan in a socket, the socket would spout a bigger horn than the socket with the Rinnegan. That's why the Obito's Rinnegan side came out with a small horn. Madara's Rinnegan didn't spout a horn at all since he's the original user, and has much higher mastery of the eye.
It didn't evolve into the Sharingan. Hagaromo stripped the Rinnegan of it's Yang, genetically engineering it to be weaker. So it's more like forced devolution to me.
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