So Manga?
Kabuto has no knowledge on Hiraishin, Itachi tells Minato that Kabuto has Sage Mode. Minato knows how Sage Mode works since he was Jiraiya's student and if Jiraiya learned Minato's technique ( Rasengan ) I assume Minato at least knows how Jiraiya's works.
Knowing this Minato will scatter his kunai and tag Itachi who chills in Susanoo since he's an edo. Nagato can't do **** against Susanoo since Preta is Melee and if he comes in range Itachi will totsuka the hell out of him.
Minato only needs to stay back in case Kabuto uses the sound genjutsu, case in which, if it hits Itachi, Minato will FTG to him and take him to a safe spot until he recovers ( he can keep doing it since he's an edo ).
Kabuto, being a human, has limited chakra and once his Sage Mode runs out ( and Minato is probably the best staller in the Narutoverse, especially edo ) he's useless. An Amaterasu should take him out. Izanami works, too, but that's overkill.
Nagato, while probably being the strongest on the field is let down by the fact that he has no way of reaching Itachi and Minato who are inside the Susanoo now. If Itachi doesn't manage to seal him there is always Tsukuyomi and even a second caught in it will result in Minato blitzing towards him and sealing.
Minato and Itachi win this.