I was thinking about that earlier today... When does Jinton become an "attack"? When the Jutsu is first cast or when the orb in the center explodes?
If it's the former, Yata counters.
If it's the latter, Yata is bypassed.
yata mirror has no shape or form but can change form to fit the attack its defending.it blocks all ninshuu . i.e, genjutsu,ninjutsu,taijutsu,spiritual attacks,yin, yang , nature, EVERYTHING.
look it up on naruto wiki
Jinton breaks down all matter to dust. Yata isn't matter and neither is susanoo. Jinton has been shown to encase susanoo and break down the user from the inside, but if Yata can wrap all the way around it to block the technique from accomplishing its function then yes. Yata> Jinton
Yata Mirror and Totsuka blade are probably the most broken weapons in the NV. They more or less came out of nowhere and appear to be quite powerful, yet have few feats to judge and comprehend them completely. I really don't know. It's stated to be able to negate any elements, but we haven't seen a kekkei genki used against it. Jinton is an anti-matter element that breaks things down at the molecular level. The best bet I could say is whoever has the greater chakra will win. When it comes to mokuton, senjutsu, onmyouton and the gudou damas however, no, I'd say they could destroy the Yata Mirror.