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As we all know by this point, mokuton has shown the capability of suppressing bijuu chakra. So much so that it has been said that Hashirama himself was in control of several of the beasts, and even handed them out amongst the shinobi nations as a means of creating a balance of power throughout the world. I believe the reason for the uncanny bijuu-suppressing abilities of mokuton is the fact that the Juubi itself is made of wood. The following scan shows the Gedo Mazou being capable of producing Zetsus, who on numerous occasion have been said to possess DNA of Hashirama Senju.
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The Gedo Mazou being made of mokuton, and previously being the shell/body of the Juubi indicates that mokuton must have immense abilities of confining and suppressing chakra to have contained all the Juubi's chakra within its body. The next scan goes into the Juubi being the supposed progenitor of all that exists in this world. Mokuton has been stated to convert its users chakra into life. The Progenitor of all that exists in this world grows Hashirama-like Zetsu, that when using the mokuton KKG have the ability to literally create new life? Doesnt seem much like a coincidence.
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Lastly ill show aged Madara.
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In his own words he says that if he was to become disconnected to the Mazou, he would lose his life. Once again, the progenitor of all life, mokuton which itself is life, is the only thing keeping Madara alive well past his years. From this i think its safe to conclude just where mokuton originates from, and why it is so effective at capturing/suppressing bijuu.